Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm25569-201ENSMUST00000157175 131 ntBASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm11942-201ENSMUST00000180255 345 ntBASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm20781-201ENSMUST00000193154 693 ntBASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm21736-201ENSMUST00000195399 693 ntBASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm43506-201ENSMUST00000200675 753 ntBASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm45094-201ENSMUST00000207013 617 ntBASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm14005-208ENSMUST00000223654 681 ntBASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rrp8Q9DB85 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Gm13094-201ENSMUST00000117930 409 ntBASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.93□□□□□ -0.66
Rrp8Q9DB85 Gm19918-201ENSMUST00000194858 400 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms