Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp16Q99LG0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp16Q99LG0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp16Q99LG0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp16Q99LG0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp16Q99LG0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp16Q99LG0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp16Q99LG0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.18□□□□□ -0.14
Usp16Q99LG0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm29155-201ENSMUST00000185910 269 ntBASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Gm38055-201ENSMUST00000195353 2217 ntBASIC14.18□□□□□ -0.14
Usp16Q99LG0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp16Q99LG0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp16Q99LG0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.17□□□□□ -0.14
Usp16Q99LG0 AC149588.2-201ENSMUST00000228182 1859 ntBASIC14.17□□□□□ -0.14
Usp16Q99LG0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm12389-201ENSMUST00000117696 418 ntBASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm26976-201ENSMUST00000182929 908 ntBASIC14.17□□□□□ -0.14
Usp16Q99LG0 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm18059-201ENSMUST00000208073 580 ntBASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm45120-201ENSMUST00000208880 408 ntBASIC14.17□□□□□ -0.14
Usp16Q99LG0 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm8255-201ENSMUST00000218693 305 ntBASIC14.17□□□□□ -0.14
Usp16Q99LG0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC14.17□□□□□ -0.14
Usp16Q99LG0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp16Q99LG0 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.16□□□□□ -0.14
Usp16Q99LG0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp16Q99LG0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp16Q99LG0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp16Q99LG0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp16Q99LG0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Usp16Q99LG0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms