Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm14193-201ENSMUST00000105067 153 ntBASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm13809-201ENSMUST00000117921 597 ntBASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm8302-201ENSMUST00000119217 852 ntBASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.51□□□□□ -0.57
Trim60Q8VI40 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim60Q8VI40 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Mir3102-201ENSMUST00000175555 104 ntBASIC11.51□□□□□ -0.57
Trim60Q8VI40 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm43852-201ENSMUST00000202098 917 ntBASIC11.51□□□□□ -0.57
Trim60Q8VI40 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.51□□□□□ -0.57
Trim60Q8VI40 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.51□□□□□ -0.57
Trim60Q8VI40 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm13035-201ENSMUST00000117496 342 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm7851-201ENSMUST00000117574 323 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm8111-201ENSMUST00000117659 987 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm15515-201ENSMUST00000117827 822 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm16219-201ENSMUST00000120096 274 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm11244-201ENSMUST00000121243 237 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm9089-201ENSMUST00000122027 526 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm19246-201ENSMUST00000173599 255 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gm27441-201ENSMUST00000185000 105 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.5□□□□□ -0.57
Trim60Q8VI40 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim60Q8VI40 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms