Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm16071-201ENSMUST00000119589 793 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm14942-201ENSMUST00000119642 336 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Mir1943-201ENSMUST00000158276 73 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm17391-201ENSMUST00000171036 126 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm19246-201ENSMUST00000173599 255 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm27910-201ENSMUST00000185004 107 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm17826-201ENSMUST00000189720 798 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm37299-201ENSMUST00000193951 826 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.5□□□□□ -0.73
Clrn1Q8K445 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.5□□□□□ -0.73
Clrn1Q8K445 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.49□□□□□ -0.73
Clrn1Q8K445 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.49□□□□□ -0.73
Clrn1Q8K445 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Gm23771-201ENSMUST00000178702 110 ntBASIC10.49□□□□□ -0.73
Clrn1Q8K445 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Mt1-202ENSMUST00000211807 1085 ntBASIC10.49□□□□□ -0.73
Clrn1Q8K445 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.49□□□□□ -0.73
Clrn1Q8K445 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Gm10020-201ENSMUST00000081993 612 ntBASIC10.49□□□□□ -0.73
Clrn1Q8K445 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.49□□□□□ -0.73
Clrn1Q8K445 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Clrn1Q8K445 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.49□□□□□ -0.73
Clrn1Q8K445 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.49□□□□□ -0.73
Clrn1Q8K445 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.48□□□□□ -0.73
Clrn1Q8K445 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.48□□□□□ -0.73
Clrn1Q8K445 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms