Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm44323-201ENSMUST00000198689 129 ntBASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Gm16380-201ENSMUST00000077997 478 ntBASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Gm8420-201ENSMUST00000097103 598 ntBASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh8Q7TSK3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm15528-201ENSMUST00000117821 864 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm13600-201ENSMUST00000117949 744 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm9081-201ENSMUST00000182346 991 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm7593-201ENSMUST00000187246 644 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm28833-201ENSMUST00000189671 559 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm8197-202ENSMUST00000193422 934 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm7082-201ENSMUST00000209880 969 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm18968-201ENSMUST00000221319 862 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 BC043934-202ENSMUST00000185694 2356 ntBASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh8Q7TSK3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh8Q7TSK3 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms