Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ctdp1Q7TSG2 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ctdp1Q7TSG2 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ctdp1Q7TSG2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
Ctdp1Q7TSG2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ctdp1Q7TSG2 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ctdp1Q7TSG2 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Ctdp1Q7TSG2 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Gm12566-201ENSMUST00000121479 359 ntBASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ctdp1Q7TSG2 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm23596-201ENSMUST00000104304 132 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm14263-201ENSMUST00000117955 746 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm7150-201ENSMUST00000122032 981 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm28686-201ENSMUST00000187404 609 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm45113-201ENSMUST00000207518 165 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm21811-201ENSMUST00000096485 930 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctdp1Q7TSG2 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.12□□□□□ -0.47
Ctdp1Q7TSG2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms