Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm37975-201ENSMUST00000195494 2099 ntBASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Zfp672-202ENSMUST00000064786 2765 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm12015-201ENSMUST00000117065 843 ntBASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm13297-201ENSMUST00000120205 934 ntBASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm7722-201ENSMUST00000120646 741 ntBASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.52□□□□□ -0.72
Rnf220Q6PDX6 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rnf220Q6PDX6 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rnf220Q6PDX6 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Rnf220Q6PDX6 Gm10531-201ENSMUST00000193527 2303 ntBASIC10.52□□□□□ -0.72
Rnf220Q6PDX6 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rnf220Q6PDX6 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rnf220Q6PDX6 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Gm26956-201ENSMUST00000182176 986 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Olfr284-202ENSMUST00000206647 966 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Gm18054-201ENSMUST00000207539 555 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Gm10312-201ENSMUST00000078515 489 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf220Q6PDX6 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 560.1 ms