Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Gm13888-201ENSMUST00000119148 422 ntBASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.3□□□□□ -0.6
Casc4Q6P2L7 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm13422-201ENSMUST00000118834 504 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm15374-201ENSMUST00000119313 844 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm14395-201ENSMUST00000120494 563 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm37458-201ENSMUST00000194055 410 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm43520-201ENSMUST00000197996 164 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Snora73b-201ENSMUST00000083419 205 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Casc4Q6P2L7 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms