Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cul4aQ3TCH7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm25226-201ENSMUST00000158198 123 ntBASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cul4aQ3TCH7 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Gm23251-201ENSMUST00000103773 110 ntBASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Mir877-201ENSMUST00000104738 85 ntBASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Gm7666-201ENSMUST00000146631 819 ntBASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Gm37981-201ENSMUST00000194280 535 ntBASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Gm43852-201ENSMUST00000202098 917 ntBASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.65□□□□□ -0.54
Cul4aQ3TCH7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms