Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm5529-201ENSMUST00000165691 891 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm37852-201ENSMUST00000193027 350 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm6677-201ENSMUST00000195100 441 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm5870-201ENSMUST00000196461 282 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Col9a2Q07643 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm18204-201ENSMUST00000209835 793 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm5178-201ENSMUST00000219380 898 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.05□□□□□ -0.48
Col9a2Q07643 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col9a2Q07643 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a2Q07643 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.04□□□□□ -0.48
Col9a2Q07643 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col9a2Q07643 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.04□□□□□ -0.48
Col9a2Q07643 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm15982-201ENSMUST00000121681 554 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm18014-201ENSMUST00000183369 817 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm42660-201ENSMUST00000197733 947 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm6423-201ENSMUST00000204315 934 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.04□□□□□ -0.48
Col9a2Q07643 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col9a2Q07643 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col9a2Q07643 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col9a2Q07643 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.04□□□□□ -0.48
Col9a2Q07643 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a2Q07643 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.03□□□□□ -0.48
Col9a2Q07643 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Col9a2Q07643 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a2Q07643 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms