Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Gm19587-201ENSMUST00000191395 545 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 Gm42660-201ENSMUST00000197733 947 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 Gm25053-202ENSMUST00000199731 132 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 Gm44216-201ENSMUST00000203942 157 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Sox8Q04886 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox8Q04886 Gm8255-201ENSMUST00000218693 305 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox8Q04886 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 Capsl-202ENSMUST00000226688 739 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox8Q04886 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox8Q04886 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox8Q04886 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sox8Q04886 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sox8Q04886 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.73□□□□□ -0.53
Sox8Q04886 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sox8Q04886 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox8Q04886 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox8Q04886 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox8Q04886 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sox8Q04886 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Sox8Q04886 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sox8Q04886 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm25562-201ENSMUST00000104608 133 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sox8Q04886 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm11560-201ENSMUST00000117567 948 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Gm13445-201ENSMUST00000121664 307 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm25830-201ENSMUST00000158923 132 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Gm17221-201ENSMUST00000163909 481 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm17073-201ENSMUST00000168069 556 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Mir7035-201ENSMUST00000184713 82 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Gm19927-201ENSMUST00000185792 781 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox8Q04886 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox8Q04886 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox8Q04886 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.72□□□□□ -0.53
Sox8Q04886 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox8Q04886 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox8Q04886 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sox8Q04886 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox8Q04886 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox8Q04886 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.71□□□□□ -0.53
Sox8Q04886 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox8Q04886 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms