Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Gm44364-201ENSMUST00000198368 141 ntBASIC10.54□□□□□ -0.72
Apoa1Q00623 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.54□□□□□ -0.72
Apoa1Q00623 Gm45433-201ENSMUST00000209386 247 ntBASIC10.54□□□□□ -0.72
Apoa1Q00623 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
Apoa1Q00623 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.54□□□□□ -0.72
Apoa1Q00623 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.54□□□□□ -0.72
Apoa1Q00623 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.54□□□□□ -0.72
Apoa1Q00623 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Apoa1Q00623 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.54□□□□□ -0.72
Apoa1Q00623 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Apoa1Q00623 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Mir1896-201ENSMUST00000122641 81 ntBASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Apoa1Q00623 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm2965-201ENSMUST00000198365 343 ntBASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm43758-201ENSMUST00000199500 367 ntBASIC10.53□□□□□ -0.72
Apoa1Q00623 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm5302-201ENSMUST00000202130 796 ntBASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.53□□□□□ -0.72
Apoa1Q00623 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.53□□□□□ -0.72
Apoa1Q00623 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.53□□□□□ -0.72
Apoa1Q00623 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoa1Q00623 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Apoa1Q00623 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Apoa1Q00623 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.52□□□□□ -0.72
Apoa1Q00623 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.52□□□□□ -0.72
Apoa1Q00623 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Apoa1Q00623 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Apoa1Q00623 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Apoa1Q00623 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Apoa1Q00623 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.52□□□□□ -0.73
Apoa1Q00623 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoa1Q00623 Gm12247-201ENSMUST00000117585 670 ntBASIC10.52□□□□□ -0.73
Apoa1Q00623 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.52□□□□□ -0.73
Apoa1Q00623 Gm15711-201ENSMUST00000118889 535 ntBASIC10.52□□□□□ -0.73
Apoa1Q00623 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms