Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smn1P97801 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smn1P97801 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smn1P97801 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.51□□□□□ -0.89
Smn1P97801 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.51□□□□□ -0.89
Smn1P97801 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
Smn1P97801 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.51□□□□□ -0.89
Smn1P97801 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.51□□□□□ -0.89
Smn1P97801 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smn1P97801 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.51□□□□□ -0.89
Smn1P97801 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.51□□□□□ -0.89
Smn1P97801 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.51□□□□□ -0.89
Smn1P97801 Gm10807-201ENSMUST00000177134 795 ntBASIC9.51□□□□□ -0.89
Smn1P97801 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smn1P97801 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gm18038-201ENSMUST00000197900 485 ntBASIC9.51□□□□□ -0.89
Smn1P97801 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC9.51□□□□□ -0.89
Smn1P97801 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gm13097-201ENSMUST00000210722 397 ntBASIC9.51□□□□□ -0.89
Smn1P97801 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.51□□□□□ -0.89
Smn1P97801 Gm6867-201ENSMUST00000219165 425 ntBASIC9.51□□□□□ -0.89
Smn1P97801 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.51□□□□□ -0.89
Smn1P97801 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.51□□□□□ -0.89
Smn1P97801 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.51□□□□□ -0.89
Smn1P97801 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.51□□□□□ -0.89
Smn1P97801 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smn1P97801 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Smn1P97801 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.5□□□□□ -0.89
Smn1P97801 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Gm15711-201ENSMUST00000118889 535 ntBASIC9.5□□□□□ -0.89
Smn1P97801 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Gm13665-201ENSMUST00000120830 528 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Gm14381-201ENSMUST00000122105 414 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.5□□□□□ -0.89
Smn1P97801 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC9.5□□□□□ -0.89
Smn1P97801 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Gm22846-201ENSMUST00000157706 270 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Gm26361-201ENSMUST00000158868 186 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smn1P97801 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Gm37597-201ENSMUST00000191853 382 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Gm44262-201ENSMUST00000204969 372 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smn1P97801 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Smn1P97801 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.5□□□□□ -0.89
Smn1P97801 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 178 ms