Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.05□□□□□ -0.8
Lsm3P62311 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC10.05□□□□□ -0.8
Lsm3P62311 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Lsm3P62311 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Lsm3P62311 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.04□□□□□ -0.8
Lsm3P62311 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.04□□□□□ -0.8
Lsm3P62311 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Gm8515-201ENSMUST00000194852 576 ntBASIC10.04□□□□□ -0.8
Lsm3P62311 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.04□□□□□ -0.8
Lsm3P62311 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.04□□□□□ -0.8
Lsm3P62311 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.04□□□□□ -0.8
Lsm3P62311 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lsm3P62311 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lsm3P62311 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lsm3P62311 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lsm3P62311 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm3P62311 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Lsm3P62311 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lsm3P62311 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
Lsm3P62311 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm3P62311 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.03□□□□□ -0.8
Lsm3P62311 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.03□□□□□ -0.8
Lsm3P62311 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.03□□□□□ -0.8
Lsm3P62311 Gm43818-201ENSMUST00000200605 466 ntBASIC10.03□□□□□ -0.8
Lsm3P62311 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.03□□□□□ -0.8
Lsm3P62311 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.03□□□□□ -0.8
Lsm3P62311 Gm2553-201ENSMUST00000215986 605 ntBASIC10.03□□□□□ -0.8
Lsm3P62311 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.03□□□□□ -0.8
Lsm3P62311 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.03□□□□□ -0.8
Lsm3P62311 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Lsm3P62311 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm3P62311 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lsm3P62311 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm3P62311 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm3P62311 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms