Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Lmo4P61969 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9□□□□□ -0.97
Lmo4P61969 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9□□□□□ -0.97
Lmo4P61969 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Lmo4P61969 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC8.99□□□□□ -0.97
Lmo4P61969 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC8.99□□□□□ -0.97
Lmo4P61969 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC8.99□□□□□ -0.97
Lmo4P61969 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Lmo4P61969 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC8.99□□□□□ -0.97
Lmo4P61969 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Lmo4P61969 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm12943-201ENSMUST00000119616 210 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Gm12136-201ENSMUST00000120460 1209 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Mir1893-201ENSMUST00000122565 83 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC8.99□□□□□ -0.97
Lmo4P61969 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC8.99□□□□□ -0.97
Lmo4P61969 Ighv1-2-201ENSMUST00000195325 378 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Gm42751-201ENSMUST00000198065 559 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm29763-201ENSMUST00000205306 616 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Gm44552-201ENSMUST00000205458 1247 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm45085-201ENSMUST00000209100 441 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC8.99□□□□□ -0.97
Lmo4P61969 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm26782-203ENSMUST00000227103 751 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 AC142266.1-201ENSMUST00000228107 415 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm7405-201ENSMUST00000121476 1337 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm5766-201ENSMUST00000160520 1977 ntBASIC8.99□□□□□ -0.97
Lmo4P61969 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Lmo4P61969 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.98□□□□□ -0.97
Lmo4P61969 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC8.98□□□□□ -0.97
Lmo4P61969 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Lmo4P61969 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Gm43984-201ENSMUST00000204572 2864 ntBASIC8.98□□□□□ -0.97
Lmo4P61969 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
Lmo4P61969 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC8.98□□□□□ -0.97
Lmo4P61969 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC8.98□□□□□ -0.97
Lmo4P61969 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC8.98□□□□□ -0.97
Lmo4P61969 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC8.98□□□□□ -0.97
Lmo4P61969 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC8.98□□□□□ -0.97
Lmo4P61969 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Lmo4P61969 Gm45258-201ENSMUST00000210042 853 ntBASIC8.98□□□□□ -0.97
Lmo4P61969 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms