Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Gm23612-201ENSMUST00000103823 110 ntBASIC11.88□□□□□ -0.51
NrlP54846 Gm11957-201ENSMUST00000118304 779 ntBASIC11.88□□□□□ -0.51
NrlP54846 Gm13981-201ENSMUST00000122360 447 ntBASIC11.88□□□□□ -0.51
NrlP54846 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.88□□□□□ -0.51
NrlP54846 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.88□□□□□ -0.51
NrlP54846 Gm9372-201ENSMUST00000168454 430 ntBASIC11.88□□□□□ -0.51
NrlP54846 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NrlP54846 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Gm26272-201ENSMUST00000179241 132 ntBASIC11.88□□□□□ -0.51
NrlP54846 Gm23576-201ENSMUST00000179918 110 ntBASIC11.88□□□□□ -0.51
NrlP54846 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.88□□□□□ -0.51
NrlP54846 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.88□□□□□ -0.51
NrlP54846 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.88□□□□□ -0.51
NrlP54846 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.88□□□□□ -0.51
NrlP54846 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.88□□□□□ -0.51
NrlP54846 Gm40879-201ENSMUST00000220759 612 ntBASIC11.88□□□□□ -0.51
NrlP54846 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.88□□□□□ -0.51
NrlP54846 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Gm10254-201ENSMUST00000052888 867 ntBASIC11.88□□□□□ -0.51
NrlP54846 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.88□□□□□ -0.51
NrlP54846 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.88□□□□□ -0.51
NrlP54846 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
NrlP54846 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NrlP54846 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
NrlP54846 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Gm22594-201ENSMUST00000104251 130 ntBASIC11.87□□□□□ -0.51
NrlP54846 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.87□□□□□ -0.51
NrlP54846 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.87□□□□□ -0.51
NrlP54846 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.87□□□□□ -0.51
NrlP54846 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.87□□□□□ -0.51
NrlP54846 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
NrlP54846 Gm25580-201ENSMUST00000083409 327 ntBASIC11.87□□□□□ -0.51
NrlP54846 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.87□□□□□ -0.51
NrlP54846 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.87□□□□□ -0.51
NrlP54846 Rgr-203ENSMUST00000225070 4704 ntBASIC11.87□□□□□ -0.51
NrlP54846 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
NrlP54846 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.87□□□□□ -0.51
NrlP54846 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NrlP54846 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
NrlP54846 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.87□□□□□ -0.51
NrlP54846 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NrlP54846 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NrlP54846 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
NrlP54846 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
NrlP54846 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.86□□□□□ -0.51
NrlP54846 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NrlP54846 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.86□□□□□ -0.51
NrlP54846 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.86□□□□□ -0.51
NrlP54846 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NrlP54846 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NrlP54846 Gm19246-201ENSMUST00000173599 255 ntBASIC11.86□□□□□ -0.51
NrlP54846 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NrlP54846 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NrlP54846 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NrlP54846 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms