Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.77□□□□□ -0.53
Shmt1P50431 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.77□□□□□ -0.53
Shmt1P50431 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Shmt1P50431 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
Shmt1P50431 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
Shmt1P50431 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Shmt1P50431 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm14807-201ENSMUST00000116640 983 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.76□□□□□ -0.53
Shmt1P50431 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm22379-201ENSMUST00000157480 131 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Gm16030-201ENSMUST00000159098 603 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm7082-201ENSMUST00000209880 969 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm18514-201ENSMUST00000218980 436 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.76□□□□□ -0.53
Shmt1P50431 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Shmt1P50431 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Shmt1P50431 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shmt1P50431 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shmt1P50431 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Shmt1P50431 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.75□□□□□ -0.53
Shmt1P50431 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Shmt1P50431 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Shmt1P50431 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.75□□□□□ -0.53
Shmt1P50431 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Shmt1P50431 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Shmt1P50431 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Shmt1P50431 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.75□□□□□ -0.53
Shmt1P50431 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.75□□□□□ -0.53
Shmt1P50431 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.75□□□□□ -0.53
Shmt1P50431 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.75□□□□□ -0.53
Shmt1P50431 Gm44814-201ENSMUST00000207018 434 ntBASIC11.75□□□□□ -0.53
Shmt1P50431 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Shmt1P50431 Gm18059-201ENSMUST00000208073 580 ntBASIC11.75□□□□□ -0.53
Shmt1P50431 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.75□□□□□ -0.53
Shmt1P50431 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Shmt1P50431 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shmt1P50431 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms