Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.75□□□□□ -0.85
Upk2P38575 Gm9132-201ENSMUST00000210182 832 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Mt1-202ENSMUST00000211807 1085 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Upk2P38575 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Upk2P38575 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.74□□□□□ -0.85
Upk2P38575 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Upk2P38575 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.74□□□□□ -0.85
Upk2P38575 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Gm9133-201ENSMUST00000118289 540 ntBASIC9.74□□□□□ -0.85
Upk2P38575 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.74□□□□□ -0.85
Upk2P38575 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.74□□□□□ -0.85
Upk2P38575 Gm26461-201ENSMUST00000175064 290 ntBASIC9.74□□□□□ -0.85
Upk2P38575 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.74□□□□□ -0.85
Upk2P38575 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.74□□□□□ -0.85
Upk2P38575 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.74□□□□□ -0.85
Upk2P38575 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.74□□□□□ -0.85
Upk2P38575 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.74□□□□□ -0.85
Upk2P38575 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Upk2P38575 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Upk2P38575 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Upk2P38575 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
Upk2P38575 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Upk2P38575 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Upk2P38575 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Gm12986-201ENSMUST00000119037 967 ntBASIC9.73□□□□□ -0.85
Upk2P38575 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Upk2P38575 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Mir6979-201ENSMUST00000183927 56 ntBASIC9.73□□□□□ -0.85
Upk2P38575 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Upk2P38575 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.73□□□□□ -0.85
Upk2P38575 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.73□□□□□ -0.85
Upk2P38575 Gm44100-201ENSMUST00000204329 436 ntBASIC9.73□□□□□ -0.85
Upk2P38575 Gm44980-201ENSMUST00000205826 314 ntBASIC9.73□□□□□ -0.85
Upk2P38575 Gm5599-201ENSMUST00000209602 788 ntBASIC9.73□□□□□ -0.85
Upk2P38575 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms