Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm15374-201ENSMUST00000119313 844 ntBASIC10.84□□□□□ -0.67
Hoxc11P31313 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxc11P31313 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm9135-201ENSMUST00000182963 990 ntBASIC10.84□□□□□ -0.67
Hoxc11P31313 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Hoxc11P31313 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
Hoxc11P31313 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm30671-201ENSMUST00000214898 318 ntBASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm5805-201ENSMUST00000072779 456 ntBASIC10.84□□□□□ -0.67
Hoxc11P31313 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.84□□□□□ -0.67
Hoxc11P31313 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.84□□□□□ -0.67
Hoxc11P31313 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc11P31313 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc11P31313 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Hoxc11P31313 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 AC160340.2-201ENSMUST00000220812 3675 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm14807-201ENSMUST00000116640 983 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm14270-201ENSMUST00000118388 846 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm8302-201ENSMUST00000119217 852 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc11P31313 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm22877-201ENSMUST00000175451 105 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Mir7051-201ENSMUST00000184167 73 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm8197-202ENSMUST00000193422 934 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc11P31313 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.83□□□□□ -0.68
Hoxc11P31313 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc11P31313 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Hoxc11P31313 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms