Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nckap1P28660 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nckap1P28660 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.13□□□□□ -0.63
Nckap1P28660 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nckap1P28660 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Nckap1P28660 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Nckap1P28660 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.13□□□□□ -0.63
Nckap1P28660 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nckap1P28660 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nckap1P28660 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.13□□□□□ -0.63
Nckap1P28660 Gm6158-201ENSMUST00000109467 904 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.13□□□□□ -0.63
Nckap1P28660 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Gm17221-201ENSMUST00000163909 481 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Gm17073-201ENSMUST00000168069 556 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Gm5621-201ENSMUST00000187303 640 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Gm37365-201ENSMUST00000193109 409 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.13□□□□□ -0.63
Nckap1P28660 Gm44814-201ENSMUST00000207018 434 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Gm9102-201ENSMUST00000219250 465 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.13□□□□□ -0.63
Nckap1P28660 Id2-203ENSMUST00000222667 958 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.13□□□□□ -0.63
Nckap1P28660 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nckap1P28660 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nckap1P28660 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nckap1P28660 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Nckap1P28660 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nckap1P28660 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nckap1P28660 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nckap1P28660 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.12□□□□□ -0.63
Nckap1P28660 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.12□□□□□ -0.63
Nckap1P28660 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.12□□□□□ -0.63
Nckap1P28660 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.12□□□□□ -0.63
Nckap1P28660 Gm4862-201ENSMUST00000170405 438 ntBASIC11.12□□□□□ -0.63
Nckap1P28660 Gm24809-201ENSMUST00000175318 271 ntBASIC11.12□□□□□ -0.63
Nckap1P28660 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.12□□□□□ -0.63
Nckap1P28660 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.12□□□□□ -0.63
Nckap1P28660 Gm26670-202ENSMUST00000226862 340 ntBASIC11.12□□□□□ -0.63
Nckap1P28660 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Gm25580-201ENSMUST00000083409 327 ntBASIC11.12□□□□□ -0.63
Nckap1P28660 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nckap1P28660 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.12□□□□□ -0.63
Nckap1P28660 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nckap1P28660 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms