Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rpl3P27659 Gm12217-201ENSMUST00000118858 696 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 Gm4917-201ENSMUST00000121452 650 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.55□□□□□ -0.72
Rpl3P27659 Gm25492-201ENSMUST00000157383 129 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 Gm24992-201ENSMUST00000157412 130 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 Gm23699-201ENSMUST00000158835 135 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Gm27441-201ENSMUST00000185000 105 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.55□□□□□ -0.72
Rpl3P27659 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.55□□□□□ -0.72
Rpl3P27659 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
Rpl3P27659 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.55□□□□□ -0.72
Rpl3P27659 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rpl3P27659 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.55□□□□□ -0.72
Rpl3P27659 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rpl3P27659 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rpl3P27659 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rpl3P27659 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rpl3P27659 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.54□□□□□ -0.72
Rpl3P27659 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Gm12997-201ENSMUST00000120207 640 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Gm11836-201ENSMUST00000121022 441 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Mir1896-201ENSMUST00000122641 81 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.54□□□□□ -0.72
Rpl3P27659 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.54□□□□□ -0.72
Rpl3P27659 Gm23045-201ENSMUST00000175041 96 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Gm5468-202ENSMUST00000227851 682 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rpl3P27659 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rpl3P27659 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Rpl3P27659 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.54□□□□□ -0.72
Rpl3P27659 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.54□□□□□ -0.72
Rpl3P27659 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rpl3P27659 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rpl3P27659 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rpl3P27659 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Rpl3P27659 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rpl3P27659 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rpl3P27659 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms