Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm7666-201ENSMUST00000146631 819 ntBASIC10.85□□□□□ -0.67
Cdh17Q9R100 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm28032-201ENSMUST00000184104 96 ntBASIC10.85□□□□□ -0.67
Cdh17Q9R100 Mir7051-201ENSMUST00000184167 73 ntBASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm28746-201ENSMUST00000187453 380 ntBASIC10.85□□□□□ -0.67
Cdh17Q9R100 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm10774-201ENSMUST00000188689 204 ntBASIC10.85□□□□□ -0.67
Cdh17Q9R100 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.85□□□□□ -0.67
Cdh17Q9R100 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.85□□□□□ -0.67
Cdh17Q9R100 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Gm15615-201ENSMUST00000118876 198 ntBASIC10.84□□□□□ -0.67
Cdh17Q9R100 Gm8302-201ENSMUST00000119217 852 ntBASIC10.84□□□□□ -0.67
Cdh17Q9R100 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.84□□□□□ -0.67
Cdh17Q9R100 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Gm9111-201ENSMUST00000219394 709 ntBASIC10.84□□□□□ -0.67
Cdh17Q9R100 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Ginm1-202ENSMUST00000065124 300 ntBASIC10.84□□□□□ -0.67
Cdh17Q9R100 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdh17Q9R100 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdh17Q9R100 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cdh17Q9R100 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 AA474408-201ENSMUST00000098110 3339 ntBASIC10.83□□□□□ -0.68
Cdh17Q9R100 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdh17Q9R100 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms