Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Mir1192-201ENSMUST00000116976 121 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm24992-201ENSMUST00000157412 130 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Mir6998-201ENSMUST00000183343 64 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm37631-201ENSMUST00000192275 364 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm43163-201ENSMUST00000196571 442 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm10752-201ENSMUST00000218348 729 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm10263-201ENSMUST00000085163 300 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Otud1Q9CUB6 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Gm25766-201ENSMUST00000104101 131 ntBASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Gm43966-201ENSMUST00000203301 612 ntBASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 AC147628.1-201ENSMUST00000228193 688 ntBASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Gm10617-201ENSMUST00000098368 1172 ntBASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Otud1Q9CUB6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Otud1Q9CUB6 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.72□□□□□ -0.69
Otud1Q9CUB6 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Otud1Q9CUB6 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otud1Q9CUB6 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otud1Q9CUB6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Otud1Q9CUB6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms