Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4Q99P72 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm12460-201ENSMUST00000117147 357 ntBASIC15.17■□□□□ 0.02
Rtn4Q99P72 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC15.17■□□□□ 0.02
Rtn4Q99P72 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm28929-201ENSMUST00000185330 1193 ntBASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 AY036118-201ENSMUST00000200021 923 ntBASIC15.17■□□□□ 0.02
Rtn4Q99P72 AC113305.1-201ENSMUST00000214664 724 ntBASIC15.17■□□□□ 0.02
Rtn4Q99P72 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC15.17■□□□□ 0.02
Rtn4Q99P72 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm44951-201ENSMUST00000206449 2024 ntBASIC15.17■□□□□ 0.02
Rtn4Q99P72 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gm18594-201ENSMUST00000175733 1403 ntBASIC15.17■□□□□ 0.02
Rtn4Q99P72 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rtn4Q99P72 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Cphx3-201ENSMUST00000163305 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Gm43178-201ENSMUST00000197257 1386 ntBASIC15.16■□□□□ 0.02
Rtn4Q99P72 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.16■□□□□ 0.02
Rtn4Q99P72 AC166574.4-201ENSMUST00000227165 1937 ntBASIC15.16■□□□□ 0.02
Rtn4Q99P72 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Gm14900-201ENSMUST00000120304 733 ntBASIC15.16■□□□□ 0.02
Rtn4Q99P72 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.16■□□□□ 0.02
Rtn4Q99P72 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Gm37986-201ENSMUST00000193285 383 ntBASIC15.16■□□□□ 0.02
Rtn4Q99P72 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rtn4Q99P72 Gm9555-201ENSMUST00000200908 583 ntBASIC15.16■□□□□ 0.02
Rtn4Q99P72 Gm7663-201ENSMUST00000201151 1240 ntBASIC15.16■□□□□ 0.02
Rtn4Q99P72 AL929265.1-201ENSMUST00000213427 125 ntBASIC15.16■□□□□ 0.02
Rtn4Q99P72 AC159819.1-201ENSMUST00000213911 328 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms