Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm13284-201ENSMUST00000121020 547 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm15432-201ENSMUST00000121106 195 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm15881-201ENSMUST00000148792 942 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm5599-201ENSMUST00000209602 788 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Mt1-202ENSMUST00000211807 1085 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.33□□□□□ -0.6
Trem2Q99NH8 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trem2Q99NH8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm12986-201ENSMUST00000119037 967 ntBASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm12566-201ENSMUST00000121479 359 ntBASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.32□□□□□ -0.6
Trem2Q99NH8 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.32□□□□□ -0.6
Trem2Q99NH8 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.32□□□□□ -0.6
Trem2Q99NH8 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.32□□□□□ -0.6
Trem2Q99NH8 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.32□□□□□ -0.6
Trem2Q99NH8 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.32□□□□□ -0.6
Trem2Q99NH8 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.31□□□□□ -0.6
Trem2Q99NH8 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.31□□□□□ -0.6
Trem2Q99NH8 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.31□□□□□ -0.6
Trem2Q99NH8 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trem2Q99NH8 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Gm23061-201ENSMUST00000102348 116 ntBASIC11.31□□□□□ -0.6
Trem2Q99NH8 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.31□□□□□ -0.6
Trem2Q99NH8 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.31□□□□□ -0.6
Trem2Q99NH8 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.31□□□□□ -0.6
Trem2Q99NH8 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.31□□□□□ -0.6
Trem2Q99NH8 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms