Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rnf111Q99ML9 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Rnf111Q99ML9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Nln-205ENSMUST00000224945 2486 ntBASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm8731-201ENSMUST00000118088 412 ntBASIC10.83□□□□□ -0.68
Rnf111Q99ML9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm8459-201ENSMUST00000162504 760 ntBASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm6108-201ENSMUST00000208365 367 ntBASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf111Q99ML9 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf111Q99ML9 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms