Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm21736-201ENSMUST00000195399 693 ntBASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx6-1Q99MA9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm11700-201ENSMUST00000119409 403 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm7765-201ENSMUST00000182585 974 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm43377-201ENSMUST00000201640 455 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 AC114573.1-201ENSMUST00000224120 1210 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.55□□□□□ -0.72
Nkx6-1Q99MA9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm13171-201ENSMUST00000117233 391 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm13286-201ENSMUST00000117750 537 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.54□□□□□ -0.72
Nkx6-1Q99MA9 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms