Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm15707-201ENSMUST00000118804 996 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm8152-201ENSMUST00000120842 637 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm12745-201ENSMUST00000121767 214 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm20493-201ENSMUST00000173706 213 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm7985-201ENSMUST00000183329 981 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Mir6387-201ENSMUST00000184042 108 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm6312-201ENSMUST00000204060 1194 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm44640-201ENSMUST00000206894 247 ntBASIC11.83□□□□□ -0.52
Clp1Q99LI9 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Clp1Q99LI9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm24933-201ENSMUST00000103762 110 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm23252-201ENSMUST00000103776 110 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm23439-201ENSMUST00000104292 132 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm22495-201ENSMUST00000104492 126 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm26443-201ENSMUST00000179610 110 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm45258-201ENSMUST00000210042 853 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 Gm18123-201ENSMUST00000210874 822 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.82□□□□□ -0.52
Clp1Q99LI9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clp1Q99LI9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 AC154806.5-202ENSMUST00000227217 1443 ntBASIC11.81□□□□□ -0.52
Clp1Q99LI9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Clp1Q99LI9 Gm12947-201ENSMUST00000116114 420 ntBASIC11.81□□□□□ -0.52
Clp1Q99LI9 Mir1249-201ENSMUST00000116791 98 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms