Protein–RNA interactions for Protein: Q922Y2

Trim59, Tripartite motif-containing protein 59, mousemouse

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim59Q922Y2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim59Q922Y2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim59Q922Y2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim59Q922Y2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim59Q922Y2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.72□□□□□ -0.37
Trim59Q922Y2 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Gm3828-201ENSMUST00000121817 257 ntBASIC12.71□□□□□ -0.37
Trim59Q922Y2 Gm25343-201ENSMUST00000157460 107 ntBASIC12.71□□□□□ -0.37
Trim59Q922Y2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Gm9132-201ENSMUST00000210182 832 ntBASIC12.71□□□□□ -0.37
Trim59Q922Y2 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.71□□□□□ -0.37
Trim59Q922Y2 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.71□□□□□ -0.37
Trim59Q922Y2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim59Q922Y2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim59Q922Y2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Trim59Q922Y2 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim59Q922Y2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim59Q922Y2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim59Q922Y2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 AA474408-201ENSMUST00000098110 3339 ntBASIC12.7□□□□□ -0.38
Trim59Q922Y2 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim59Q922Y2 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Gm9211-201ENSMUST00000182882 975 ntBASIC12.7□□□□□ -0.38
Trim59Q922Y2 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.7□□□□□ -0.38
Trim59Q922Y2 Id2-203ENSMUST00000222667 958 ntBASIC12.7□□□□□ -0.38
Trim59Q922Y2 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim59Q922Y2 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.69□□□□□ -0.38
Trim59Q922Y2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim59Q922Y2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.69□□□□□ -0.38
Trim59Q922Y2 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm23061-201ENSMUST00000102348 116 ntBASIC12.69□□□□□ -0.38
Trim59Q922Y2 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm12663-201ENSMUST00000118481 958 ntBASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.69□□□□□ -0.38
Trim59Q922Y2 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm25554-201ENSMUST00000158075 113 ntBASIC12.69□□□□□ -0.38
Trim59Q922Y2 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim59Q922Y2 Gm5865-201ENSMUST00000198713 637 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms