Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.54□□□□□ -0.56
Trim60Q8VI40 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm25148-201ENSMUST00000104611 123 ntBASIC11.53□□□□□ -0.56
Trim60Q8VI40 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm24990-201ENSMUST00000157406 323 ntBASIC11.53□□□□□ -0.56
Trim60Q8VI40 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm18827-201ENSMUST00000188341 790 ntBASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm5733-201ENSMUST00000190232 939 ntBASIC11.53□□□□□ -0.56
Trim60Q8VI40 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.53□□□□□ -0.56
Trim60Q8VI40 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim60Q8VI40 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim60Q8VI40 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Trim60Q8VI40 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim60Q8VI40 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim60Q8VI40 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.52□□□□□ -0.56
Trim60Q8VI40 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.52□□□□□ -0.56
Trim60Q8VI40 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim60Q8VI40 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim60Q8VI40 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim60Q8VI40 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim60Q8VI40 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm15374-201ENSMUST00000119313 844 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm24844-201ENSMUST00000158679 127 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm37284-201ENSMUST00000193607 539 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm37466-201ENSMUST00000195692 652 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Mir433-201ENSMUST00000093564 124 ntBASIC11.52□□□□□ -0.57
Trim60Q8VI40 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim60Q8VI40 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.51□□□□□ -0.57
Trim60Q8VI40 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim60Q8VI40 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms