Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rprd1aQ8VDS4 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Snord17-201ENSMUST00000104526 238 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm14892-201ENSMUST00000117636 267 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm12463-201ENSMUST00000118271 849 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm12899-201ENSMUST00000120565 551 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Mir1956-201ENSMUST00000157748 65 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm8531-201ENSMUST00000188319 893 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rprd1aQ8VDS4 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rprd1aQ8VDS4 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms