Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.52□□□□□ -0.73
Clrn1Q8K445 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.52□□□□□ -0.73
Clrn1Q8K445 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.52□□□□□ -0.73
Clrn1Q8K445 Gm44980-201ENSMUST00000205826 314 ntBASIC10.52□□□□□ -0.73
Clrn1Q8K445 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.52□□□□□ -0.73
Clrn1Q8K445 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.52□□□□□ -0.73
Clrn1Q8K445 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.52□□□□□ -0.73
Clrn1Q8K445 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Clrn1Q8K445 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Clrn1Q8K445 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.52□□□□□ -0.73
Clrn1Q8K445 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.51□□□□□ -0.73
Clrn1Q8K445 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gm10731-201ENSMUST00000181171 448 ntBASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.51□□□□□ -0.73
Clrn1Q8K445 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.51□□□□□ -0.73
Clrn1Q8K445 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.51□□□□□ -0.73
Clrn1Q8K445 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.51□□□□□ -0.73
Clrn1Q8K445 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.51□□□□□ -0.73
Clrn1Q8K445 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.51□□□□□ -0.73
Clrn1Q8K445 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Clrn1Q8K445 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Clrn1Q8K445 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms