Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc17Q8CE13 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc17Q8CE13 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc17Q8CE13 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc17Q8CE13 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc17Q8CE13 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm25053-201ENSMUST00000103982 133 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm22594-201ENSMUST00000104251 130 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm25922-201ENSMUST00000104281 130 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Mir453-201ENSMUST00000104732 82 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm15197-201ENSMUST00000120526 478 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm12791-201ENSMUST00000120788 655 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm24679-201ENSMUST00000158762 111 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm18801-201ENSMUST00000186616 536 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm25053-202ENSMUST00000199731 132 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Trav11n-201ENSMUST00000200113 343 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc17Q8CE13 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm12663-201ENSMUST00000118481 958 ntBASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm14497-201ENSMUST00000119537 580 ntBASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm9162-201ENSMUST00000182081 991 ntBASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm37852-201ENSMUST00000193027 350 ntBASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Gm37284-201ENSMUST00000193607 539 ntBASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.66□□□□□ -0.54
Ccdc17Q8CE13 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms