Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Tsen54Q8C2A2 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm13296-201ENSMUST00000117854 997 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm14130-201ENSMUST00000118417 987 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm15808-201ENSMUST00000119046 604 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Rprl1-201ENSMUST00000158050 327 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm32999-201ENSMUST00000192693 562 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm45598-202ENSMUST00000210719 986 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm19994-201ENSMUST00000217086 586 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.34□□□□□ -0.91
Tsen54Q8C2A2 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.34□□□□□ -0.92
Tsen54Q8C2A2 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Tsen54Q8C2A2 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms