Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Gm14071-201ENSMUST00000117817 509 ntBASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Gm11511-201ENSMUST00000118146 540 ntBASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Gm15004-201ENSMUST00000119192 630 ntBASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.15□□□□□ -0.94
Smco3Q8BQM7 AC159896.2-201ENSMUST00000214753 269 ntBASIC9.15□□□□□ -0.94
Smco3Q8BQM7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smco3Q8BQM7 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco3Q8BQM7 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Smco3Q8BQM7 AA474408-201ENSMUST00000098110 3339 ntBASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Smco3Q8BQM7 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Rims2-204ENSMUST00000226410 3685 ntBASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Gm5370-201ENSMUST00000187187 574 ntBASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smco3Q8BQM7 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.13□□□□□ -0.95
Smco3Q8BQM7 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco3Q8BQM7 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco3Q8BQM7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smco3Q8BQM7 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.13□□□□□ -0.95
Smco3Q8BQM7 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Smco3Q8BQM7 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms