Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Gm28671-201ENSMUST00000187036 692 ntBASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Gm18555-201ENSMUST00000197935 584 ntBASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Mir744-201ENSMUST00000103261 100 ntBASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Gm30055-201ENSMUST00000203175 803 ntBASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx55Q6ZPL9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm24140-201ENSMUST00000122773 326 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Mir1941-201ENSMUST00000157834 83 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm4462-201ENSMUST00000166453 492 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm6794-201ENSMUST00000203829 457 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 Gm7904-201ENSMUST00000217049 465 ntBASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.68□□□□□ -0.38
Ddx55Q6ZPL9 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms