Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm12579-201ENSMUST00000118040 783 ntBASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm11941-201ENSMUST00000119904 610 ntBASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm15549-201ENSMUST00000121595 622 ntBASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm2965-201ENSMUST00000198365 343 ntBASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scaf4Q6PFF0 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm13916-201ENSMUST00000117368 628 ntBASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm24749-201ENSMUST00000157838 343 ntBASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm38341-201ENSMUST00000195357 515 ntBASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm7504-201ENSMUST00000201449 424 ntBASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Thoc7-209ENSMUST00000225325 765 ntBASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Gm25857-201ENSMUST00000082788 129 ntBASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scaf4Q6PFF0 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Scaf4Q6PFF0 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Scaf4Q6PFF0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Scaf4Q6PFF0 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Scaf4Q6PFF0 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Scaf4Q6PFF0 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Scaf4Q6PFF0 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms