Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm25492-201ENSMUST00000157383 129 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm3508-201ENSMUST00000186012 792 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm6439-201ENSMUST00000199849 862 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm9463-201ENSMUST00000206707 601 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Btrc-209ENSMUST00000224478 2194 ntBASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Casc4Q6P2L7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Casc4Q6P2L7 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms