Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.68□□□□□ -0.38
Gm28047Q3US59 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Gm28032-201ENSMUST00000184104 96 ntBASIC12.68□□□□□ -0.38
Gm28047Q3US59 Mir8115-201ENSMUST00000184992 119 ntBASIC12.68□□□□□ -0.38
Gm28047Q3US59 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.68□□□□□ -0.38
Gm28047Q3US59 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm28047Q3US59 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.68□□□□□ -0.38
Gm28047Q3US59 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Gm25125-201ENSMUST00000083340 136 ntBASIC12.68□□□□□ -0.38
Gm28047Q3US59 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.68□□□□□ -0.38
Gm28047Q3US59 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28047Q3US59 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm4726-201ENSMUST00000135604 736 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm6019-201ENSMUST00000148369 736 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm27441-201ENSMUST00000185000 105 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm37597-201ENSMUST00000191853 382 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm9555-201ENSMUST00000200908 583 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm45398-201ENSMUST00000210561 165 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.67□□□□□ -0.38
Gm28047Q3US59 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gm28047Q3US59 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Gm9062-201ENSMUST00000117712 727 ntBASIC12.66□□□□□ -0.38
Gm28047Q3US59 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm28047Q3US59 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Spcs1-203ENSMUST00000226374 592 ntBASIC12.66□□□□□ -0.38
Gm28047Q3US59 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28047Q3US59 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.66□□□□□ -0.38
Gm28047Q3US59 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms