Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm8832-201ENSMUST00000119890 395 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm6298-201ENSMUST00000122262 981 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Ap1g1-206ENSMUST00000179104 1096 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm29214-201ENSMUST00000190216 570 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm2404-201ENSMUST00000196197 844 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm43290-201ENSMUST00000200359 1557 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 D330041H03Rik-207ENSMUST00000181760 1362 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Il1r2-201ENSMUST00000027243 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm32849-201ENSMUST00000208696 1798 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm6684-201ENSMUST00000053717 685 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm11838-201ENSMUST00000121999 231 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm12996-201ENSMUST00000151670 636 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm28865-201ENSMUST00000187685 723 ntTSL 3 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm38941-201ENSMUST00000208606 529 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm45780-201ENSMUST00000212089 224 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm42815-201ENSMUST00000198787 1470 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Csl-201ENSMUST00000056085 1953 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Sncaip-210ENSMUST00000179689 1512 ntTSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm23079-201ENSMUST00000157847 117 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm26679-201ENSMUST00000181685 659 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Platr10-202ENSMUST00000191479 818 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 4930525C09Rik-201ENSMUST00000217919 677 ntTSL 3 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gfra2-203ENSMUST00000227697 1323 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 AC123834.1-201ENSMUST00000225346 2043 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Ntrk2-208ENSMUST00000225583 2719 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm7340-201ENSMUST00000119729 2752 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm43860-201ENSMUST00000201742 2705 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm14834-201ENSMUST00000119416 795 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm11760-201ENSMUST00000122355 796 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm16235-201ENSMUST00000146132 342 ntTSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm24307-201ENSMUST00000178512 101 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm10045-201ENSMUST00000178657 483 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Gm44920-201ENSMUST00000206503 746 ntTSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 AC131710.2-201ENSMUST00000226773 683 ntBASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Fanci-202ENSMUST00000118959 1301 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ush2AQ2QI47 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ush2AQ2QI47 Gm25723-201ENSMUST00000104530 126 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms