Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm14150-201ENSMUST00000122404 1354 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm15352-201ENSMUST00000118696 270 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm11956-201ENSMUST00000119525 512 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm23045-201ENSMUST00000175041 96 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm27438-201ENSMUST00000183480 110 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm44270-201ENSMUST00000203084 1234 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm43966-201ENSMUST00000203301 612 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm2517-201ENSMUST00000215651 348 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm18974-201ENSMUST00000221478 1031 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 AC112945.1-201ENSMUST00000226413 514 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm26660-202ENSMUST00000223620 4112 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm13910-201ENSMUST00000121752 1428 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm5124-202ENSMUST00000132683 2083 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm11667-201ENSMUST00000119828 486 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm12208-201ENSMUST00000122004 163 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm27530-201ENSMUST00000184096 98 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Mir7032-201ENSMUST00000185154 79 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm38151-201ENSMUST00000195085 289 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm43830-201ENSMUST00000198760 1067 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cdx4Q07424 Gm45113-201ENSMUST00000207518 165 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 D9Wsu149-201ENSMUST00000214169 594 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 AC153505.1-201ENSMUST00000218819 1071 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 AC134869.4-202ENSMUST00000224350 837 ntBASIC8.65□□□□□ -1.02
Cdx4Q07424 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms