Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Shc1P98083 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Shc1P98083 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Shc1P98083 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Shc1P98083 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.05□□□□□ -0.8
Shc1P98083 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Shc1P98083 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.04□□□□□ -0.8
Shc1P98083 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Shc1P98083 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Shc1P98083 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Shc1P98083 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.04□□□□□ -0.8
Shc1P98083 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Gm12463-201ENSMUST00000118271 849 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.04□□□□□ -0.8
Shc1P98083 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Gm22846-201ENSMUST00000157706 270 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Gm22138-201ENSMUST00000158748 128 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.04□□□□□ -0.8
Shc1P98083 Gm19246-201ENSMUST00000173599 255 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Shc1P98083 Gm42867-201ENSMUST00000202995 469 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Shc1P98083 Gm44551-201ENSMUST00000208804 171 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Gm5599-201ENSMUST00000209602 788 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Mt1-202ENSMUST00000211807 1085 ntBASIC10.04□□□□□ -0.8
Shc1P98083 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.04□□□□□ -0.8
Shc1P98083 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.04□□□□□ -0.8
Shc1P98083 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.04□□□□□ -0.8
Shc1P98083 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.04□□□□□ -0.8
Shc1P98083 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.04□□□□□ -0.8
Shc1P98083 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Shc1P98083 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.04□□□□□ -0.8
Shc1P98083 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Shc1P98083 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.04□□□□□ -0.8
Shc1P98083 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.04□□□□□ -0.8
Shc1P98083 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Shc1P98083 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shc1P98083 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Shc1P98083 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.03□□□□□ -0.8
Shc1P98083 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Shc1P98083 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.03□□□□□ -0.8
Shc1P98083 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Gm25766-201ENSMUST00000104101 131 ntBASIC10.03□□□□□ -0.8
Shc1P98083 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.03□□□□□ -0.8
Shc1P98083 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.03□□□□□ -0.8
Shc1P98083 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Shc1P98083 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.03□□□□□ -0.8
Shc1P98083 Gm9133-201ENSMUST00000118289 540 ntBASIC10.03□□□□□ -0.8
Shc1P98083 Gm11451-201ENSMUST00000118946 630 ntBASIC10.03□□□□□ -0.8
Shc1P98083 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Shc1P98083 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shc1P98083 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.03□□□□□ -0.8
Shc1P98083 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.03□□□□□ -0.8
Shc1P98083 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.03□□□□□ -0.8
Shc1P98083 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.03□□□□□ -0.8
Shc1P98083 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Shc1P98083 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Shc1P98083 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Shc1P98083 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.03□□□□□ -0.8
Shc1P98083 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms