Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.27□□□□□ -0.45
Lig3P97386 Gm15207-201ENSMUST00000119259 442 ntBASIC12.27□□□□□ -0.45
Lig3P97386 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.27□□□□□ -0.45
Lig3P97386 Gm12036-201ENSMUST00000120008 530 ntBASIC12.27□□□□□ -0.45
Lig3P97386 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.27□□□□□ -0.45
Lig3P97386 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.27□□□□□ -0.45
Lig3P97386 Gm24844-201ENSMUST00000158679 127 ntBASIC12.27□□□□□ -0.45
Lig3P97386 Gm18201-201ENSMUST00000174735 875 ntBASIC12.27□□□□□ -0.45
Lig3P97386 Gm18367-201ENSMUST00000176139 600 ntBASIC12.27□□□□□ -0.45
Lig3P97386 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.27□□□□□ -0.45
Lig3P97386 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lig3P97386 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lig3P97386 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.27□□□□□ -0.45
Lig3P97386 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Lig3P97386 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.27□□□□□ -0.45
Lig3P97386 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.26□□□□□ -0.45
Lig3P97386 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lig3P97386 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.26□□□□□ -0.45
Lig3P97386 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.26□□□□□ -0.45
Lig3P97386 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lig3P97386 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.26□□□□□ -0.45
Lig3P97386 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.26□□□□□ -0.45
Lig3P97386 Gm22146-201ENSMUST00000157397 288 ntBASIC12.26□□□□□ -0.45
Lig3P97386 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.26□□□□□ -0.45
Lig3P97386 Gm44647-201ENSMUST00000207402 428 ntBASIC12.26□□□□□ -0.45
Lig3P97386 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.26□□□□□ -0.45
Lig3P97386 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lig3P97386 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lig3P97386 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.26□□□□□ -0.45
Lig3P97386 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Lig3P97386 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lig3P97386 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.26□□□□□ -0.45
Lig3P97386 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.25□□□□□ -0.45
Lig3P97386 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Lig3P97386 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Gm14807-201ENSMUST00000116640 983 ntBASIC12.25□□□□□ -0.45
Lig3P97386 Gm12164-201ENSMUST00000121695 551 ntBASIC12.25□□□□□ -0.45
Lig3P97386 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.25□□□□□ -0.45
Lig3P97386 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.25□□□□□ -0.45
Lig3P97386 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.25□□□□□ -0.45
Lig3P97386 Gm12407-201ENSMUST00000180219 324 ntBASIC12.25□□□□□ -0.45
Lig3P97386 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.25□□□□□ -0.45
Lig3P97386 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.25□□□□□ -0.45
Lig3P97386 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.25□□□□□ -0.45
Lig3P97386 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.25□□□□□ -0.45
Lig3P97386 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.25□□□□□ -0.45
Lig3P97386 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.25□□□□□ -0.45
Lig3P97386 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lig3P97386 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.25□□□□□ -0.45
Lig3P97386 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms