Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.34□□□□□ -0.43
Hmgb1P63158 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmgb1P63158 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgb1P63158 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hmgb1P63158 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hmgb1P63158 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Hmgb1P63158 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Hmgb1P63158 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Hmgb1P63158 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Hmgb1P63158 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hmgb1P63158 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Hmgb1P63158 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hmgb1P63158 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Hmgb1P63158 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hmgb1P63158 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Gm15477-202ENSMUST00000143945 2351 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hmgb1P63158 Gm19165-201ENSMUST00000204453 1982 ntBASIC12.33□□□□□ -0.44
Hmgb1P63158 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Gm22920-201ENSMUST00000102175 109 ntBASIC12.33□□□□□ -0.44
Hmgb1P63158 Gm22711-201ENSMUST00000116890 133 ntBASIC12.33□□□□□ -0.44
Hmgb1P63158 Gm11244-201ENSMUST00000121243 237 ntBASIC12.33□□□□□ -0.44
Hmgb1P63158 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmgb1P63158 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Gm43852-201ENSMUST00000202098 917 ntBASIC12.33□□□□□ -0.44
Hmgb1P63158 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hmgb1P63158 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.33□□□□□ -0.44
Hmgb1P63158 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmgb1P63158 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgb1P63158 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.33□□□□□ -0.44
Hmgb1P63158 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hmgb1P63158 Gm37373-201ENSMUST00000194005 2812 ntBASIC12.33□□□□□ -0.44
Hmgb1P63158 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.32□□□□□ -0.44
Hmgb1P63158 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgb1P63158 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Snord17-201ENSMUST00000104526 238 ntBASIC12.32□□□□□ -0.44
Hmgb1P63158 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm14028-201ENSMUST00000117434 479 ntBASIC12.32□□□□□ -0.44
Hmgb1P63158 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm15808-201ENSMUST00000119046 604 ntBASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.32□□□□□ -0.44
Hmgb1P63158 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.32□□□□□ -0.44
Hmgb1P63158 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgb1P63158 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgb1P63158 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgb1P63158 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm28450-201ENSMUST00000187349 638 ntBASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.32□□□□□ -0.44
Hmgb1P63158 Gm17825-201ENSMUST00000206836 794 ntBASIC12.32□□□□□ -0.44
Hmgb1P63158 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.32□□□□□ -0.44
Hmgb1P63158 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms