Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.45□□□□□ -0.58
Ybx1P62960 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.45□□□□□ -0.58
Ybx1P62960 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ybx1P62960 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.45□□□□□ -0.58
Ybx1P62960 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ybx1P62960 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.45□□□□□ -0.58
Ybx1P62960 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.45□□□□□ -0.58
Ybx1P62960 Gm25604-201ENSMUST00000158359 133 ntBASIC11.45□□□□□ -0.58
Ybx1P62960 Snord55-201ENSMUST00000174939 79 ntBASIC11.45□□□□□ -0.58
Ybx1P62960 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.45□□□□□ -0.58
Ybx1P62960 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.45□□□□□ -0.58
Ybx1P62960 Gm5340-201ENSMUST00000203733 880 ntBASIC11.45□□□□□ -0.58
Ybx1P62960 Gm43969-201ENSMUST00000204833 535 ntBASIC11.45□□□□□ -0.58
Ybx1P62960 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.45□□□□□ -0.58
Ybx1P62960 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.45□□□□□ -0.58
Ybx1P62960 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.45□□□□□ -0.58
Ybx1P62960 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ybx1P62960 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.45□□□□□ -0.58
Ybx1P62960 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.44□□□□□ -0.58
Ybx1P62960 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ybx1P62960 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Ybx1P62960 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ybx1P62960 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ybx1P62960 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ybx1P62960 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ybx1P62960 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ybx1P62960 Gm15136-201ENSMUST00000120552 533 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 Gm11993-201ENSMUST00000121861 820 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.44□□□□□ -0.58
Ybx1P62960 Gm26368-201ENSMUST00000157826 118 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Gm5529-201ENSMUST00000165691 891 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 Trav11n-201ENSMUST00000200113 343 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 Gm9353-201ENSMUST00000200472 604 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.44□□□□□ -0.58
Ybx1P62960 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 Thoc7-209ENSMUST00000225325 765 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.44□□□□□ -0.58
Ybx1P62960 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Gm8894-201ENSMUST00000074642 666 ntBASIC11.44□□□□□ -0.58
Ybx1P62960 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ybx1P62960 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ybx1P62960 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ybx1P62960 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ybx1P62960 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.44□□□□□ -0.58
Ybx1P62960 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ybx1P62960 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ybx1P62960 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.43□□□□□ -0.58
Ybx1P62960 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.43□□□□□ -0.58
Ybx1P62960 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ybx1P62960 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms