Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Gm28424-201ENSMUST00000187393 1319 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Rpl39P62892 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC7.89□□□□□ -1.15
Rpl39P62892 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 Gm11509-201ENSMUST00000117358 325 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 Gm15617-201ENSMUST00000118973 771 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 Gm11425-201ENSMUST00000119608 498 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC7.89□□□□□ -1.15
Rpl39P62892 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Ighv4-2-201ENSMUST00000192975 362 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC7.89□□□□□ -1.15
Rpl39P62892 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Rpl39P62892 Gm32111-201ENSMUST00000207689 846 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 AC161537.1-201ENSMUST00000226199 1015 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Gm9396-201ENSMUST00000076703 567 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
Rpl39P62892 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC7.89□□□□□ -1.15
Rpl39P62892 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Rpl39P62892 AC140462.2-201ENSMUST00000225718 2433 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 CT010480.4-201ENSMUST00000224654 2283 ntBASIC7.89□□□□□ -1.15
Rpl39P62892 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Rpl39P62892 AC108416.1-201ENSMUST00000228755 1558 ntBASIC7.88□□□□□ -1.15
Rpl39P62892 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC7.88□□□□□ -1.15
Rpl39P62892 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Rpl39P62892 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Rpl39P62892 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Rpl39P62892 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Rpl39P62892 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Rpl39P62892 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Rpl39P62892 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Rpl39P62892 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Rpl39P62892 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Rpl39P62892 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Gm8862-201ENSMUST00000198379 1346 ntBASIC7.88□□□□□ -1.15
Rpl39P62892 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC7.88□□□□□ -1.15
Rpl39P62892 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Rpl39P62892 Gm11222-201ENSMUST00000119005 738 ntBASIC7.88□□□□□ -1.15
Rpl39P62892 Gm15824-201ENSMUST00000119516 955 ntBASIC7.88□□□□□ -1.15
Rpl39P62892 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC7.88□□□□□ -1.15
Rpl39P62892 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms