Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Lsm3P62311 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC10.06□□□□□ -0.8
Lsm3P62311 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Lsm3P62311 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.06□□□□□ -0.8
Lsm3P62311 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Lsm3P62311 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Lsm3P62311 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.06□□□□□ -0.8
Lsm3P62311 Gm25261-201ENSMUST00000157416 134 ntBASIC10.06□□□□□ -0.8
Lsm3P62311 Gm25226-201ENSMUST00000158198 123 ntBASIC10.06□□□□□ -0.8
Lsm3P62311 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.06□□□□□ -0.8
Lsm3P62311 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.06□□□□□ -0.8
Lsm3P62311 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.06□□□□□ -0.8
Lsm3P62311 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Gm6450-201ENSMUST00000200896 574 ntBASIC10.06□□□□□ -0.8
Lsm3P62311 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.06□□□□□ -0.8
Lsm3P62311 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Lsm3P62311 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Lsm3P62311 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Lsm3P62311 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Lsm3P62311 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
Lsm3P62311 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lsm3P62311 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Lsm3P62311 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.05□□□□□ -0.8
Lsm3P62311 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.05□□□□□ -0.8
Lsm3P62311 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Lsm3P62311 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Lsm3P62311 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Lsm3P62311 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC10.05□□□□□ -0.8
Lsm3P62311 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.05□□□□□ -0.8
Lsm3P62311 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.05□□□□□ -0.8
Lsm3P62311 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Lsm3P62311 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.05□□□□□ -0.8
Lsm3P62311 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.05□□□□□ -0.8
Lsm3P62311 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Gm38321-201ENSMUST00000195053 235 ntBASIC10.05□□□□□ -0.8
Lsm3P62311 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.05□□□□□ -0.8
Lsm3P62311 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Lsm3P62311 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.05□□□□□ -0.8
Lsm3P62311 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm3P62311 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms