Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
Pdx1P52946 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.01□□□□□ -0.65
Pdx1P52946 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Gm25766-201ENSMUST00000104101 131 ntBASIC11.01□□□□□ -0.65
Pdx1P52946 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.01□□□□□ -0.65
Pdx1P52946 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Gm45550-201ENSMUST00000209380 946 ntBASIC11.01□□□□□ -0.65
Pdx1P52946 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Gm30671-201ENSMUST00000214898 318 ntBASIC11.01□□□□□ -0.65
Pdx1P52946 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pdx1P52946 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.01□□□□□ -0.65
Pdx1P52946 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.01□□□□□ -0.65
Pdx1P52946 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.01□□□□□ -0.65
Pdx1P52946 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pdx1P52946 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Pdx1P52946 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pdx1P52946 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11□□□□□ -0.65
Pdx1P52946 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Pdx1P52946 Gm14592-201ENSMUST00000117201 560 ntBASIC11□□□□□ -0.65
Pdx1P52946 Gm14398-201ENSMUST00000117287 1073 ntBASIC11□□□□□ -0.65
Pdx1P52946 Gm15197-201ENSMUST00000120526 478 ntBASIC11□□□□□ -0.65
Pdx1P52946 Gm13284-201ENSMUST00000121020 547 ntBASIC11□□□□□ -0.65
Pdx1P52946 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11□□□□□ -0.65
Pdx1P52946 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11□□□□□ -0.65
Pdx1P52946 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11□□□□□ -0.65
Pdx1P52946 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Pdx1P52946 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11□□□□□ -0.65
Pdx1P52946 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pdx1P52946 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11□□□□□ -0.65
Pdx1P52946 CT009718.3-201ENSMUST00000221116 367 ntBASIC11□□□□□ -0.65
Pdx1P52946 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11□□□□□ -0.65
Pdx1P52946 AC156501.1-201ENSMUST00000228219 270 ntBASIC11□□□□□ -0.65
Pdx1P52946 AC135114.1-201ENSMUST00000228682 270 ntBASIC11□□□□□ -0.65
Pdx1P52946 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Gm10020-201ENSMUST00000081993 612 ntBASIC11□□□□□ -0.65
Pdx1P52946 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11□□□□□ -0.65
Pdx1P52946 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdx1P52946 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Pdx1P52946 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms