Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt1P50431 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt1P50431 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shmt1P50431 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Shmt1P50431 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt1P50431 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt1P50431 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt1P50431 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt1P50431 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Shmt1P50431 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shmt1P50431 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt1P50431 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shmt1P50431 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Shmt1P50431 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Shmt1P50431 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.78□□□□□ -0.52
Shmt1P50431 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Shmt1P50431 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.78□□□□□ -0.52
Shmt1P50431 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Shmt1P50431 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Shmt1P50431 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.78□□□□□ -0.52
Shmt1P50431 Gm14497-201ENSMUST00000119537 580 ntBASIC11.78□□□□□ -0.52
Shmt1P50431 Gm12990-201ENSMUST00000120372 468 ntBASIC11.78□□□□□ -0.52
Shmt1P50431 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.78□□□□□ -0.52
Shmt1P50431 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.78□□□□□ -0.52
Shmt1P50431 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Gm23218-201ENSMUST00000158124 276 ntBASIC11.78□□□□□ -0.52
Shmt1P50431 Gm22877-201ENSMUST00000175451 105 ntBASIC11.78□□□□□ -0.52
Shmt1P50431 Gm5298-201ENSMUST00000201122 892 ntBASIC11.78□□□□□ -0.52
Shmt1P50431 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Shmt1P50431 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Shmt1P50431 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Shmt1P50431 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Shmt1P50431 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.78□□□□□ -0.52
Shmt1P50431 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.78□□□□□ -0.52
Shmt1P50431 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.78□□□□□ -0.52
Shmt1P50431 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shmt1P50431 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Shmt1P50431 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.77□□□□□ -0.52
Shmt1P50431 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shmt1P50431 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.77□□□□□ -0.52
Shmt1P50431 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shmt1P50431 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Shmt1P50431 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shmt1P50431 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Rgr-203ENSMUST00000225070 4704 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Shmt1P50431 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.77□□□□□ -0.53
Shmt1P50431 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 Gm14219-201ENSMUST00000120414 288 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.77□□□□□ -0.53
Shmt1P50431 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Gm9081-201ENSMUST00000182346 991 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.77□□□□□ -0.53
Shmt1P50431 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.77□□□□□ -0.53
Shmt1P50431 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.77□□□□□ -0.53
Shmt1P50431 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.77□□□□□ -0.53
Shmt1P50431 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Shmt1P50431 Gm9102-201ENSMUST00000219250 465 ntBASIC11.77□□□□□ -0.53
Shmt1P50431 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Shmt1P50431 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shmt1P50431 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.77□□□□□ -0.53
Shmt1P50431 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms