Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SftpbP50405 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
SftpbP50405 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Gm17825-201ENSMUST00000206836 794 ntBASIC11.39□□□□□ -0.59
SftpbP50405 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.39□□□□□ -0.59
SftpbP50405 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.39□□□□□ -0.59
SftpbP50405 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Gm25148-201ENSMUST00000104611 123 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SftpbP50405 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.38□□□□□ -0.59
SftpbP50405 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.38□□□□□ -0.59
SftpbP50405 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Gm12407-201ENSMUST00000180219 324 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Gm4857-201ENSMUST00000192718 785 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.38□□□□□ -0.59
SftpbP50405 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.38□□□□□ -0.59
SftpbP50405 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.38□□□□□ -0.59
SftpbP50405 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.38□□□□□ -0.59
SftpbP50405 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
SftpbP50405 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
SftpbP50405 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
SftpbP50405 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.38□□□□□ -0.59
SftpbP50405 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SftpbP50405 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.37□□□□□ -0.59
SftpbP50405 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SftpbP50405 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.37□□□□□ -0.59
SftpbP50405 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SftpbP50405 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.37□□□□□ -0.59
SftpbP50405 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Gm8111-201ENSMUST00000117659 987 ntBASIC11.37□□□□□ -0.59
SftpbP50405 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.37□□□□□ -0.59
SftpbP50405 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SftpbP50405 Gm2260-201ENSMUST00000184965 657 ntBASIC11.37□□□□□ -0.59
SftpbP50405 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.37□□□□□ -0.59
SftpbP50405 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Gm42867-201ENSMUST00000202995 469 ntBASIC11.37□□□□□ -0.59
SftpbP50405 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SftpbP50405 Gm18212-201ENSMUST00000211678 889 ntBASIC11.37□□□□□ -0.59
SftpbP50405 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.37□□□□□ -0.59
SftpbP50405 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.37□□□□□ -0.59
SftpbP50405 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.37□□□□□ -0.59
SftpbP50405 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SftpbP50405 Ntng1-201ENSMUST00000051253 327 ntBASIC11.37□□□□□ -0.59
SftpbP50405 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms